NetCDF 4.10.1
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dfilter.c
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1/*
2 * Copyright 2018, University Corporation for Atmospheric Research
3 * See netcdf/COPYRIGHT file for copying and redistribution conditions.
4 */
9
10#include "config.h"
11#include <stdlib.h>
12#include <stdio.h>
13#include <string.h>
14#ifdef _MSC_VER
15#include <io.h>
16#endif
17
18#include "netcdf.h"
19#include "netcdf_filter.h"
20#include "ncdispatch.h"
21#include "nc4internal.h"
22#include "nclog.h"
23
24#ifdef USE_HDF5
25#include "hdf5internal.h"
26#endif
27
28#ifdef NETCDF_ENABLE_NCZARR
29#include "zdispatch.h"
30#endif
31
32/*
33Unified filter related code
34*/
35
36/**************************************************/
37/* Per-variable filters */
38
58EXTERNL int
59nc_inq_var_filter_ids(int ncid, int varid, size_t* nfiltersp, unsigned int* ids)
60{
61 NC* ncp;
62 int stat = NC_check_id(ncid,&ncp);
63 if(stat != NC_NOERR) return stat;
65 if((stat = ncp->dispatch->inq_var_filter_ids(ncid,varid,nfiltersp,ids))) goto done;
66
67done:
68 return stat;
69}
70
94EXTERNL int
95nc_inq_var_filter_info(int ncid, int varid, unsigned int id, size_t* nparamsp, unsigned int* params)
96{
97 NC* ncp;
98 int stat = NC_check_id(ncid,&ncp);
99 if(stat != NC_NOERR) return stat;
101 if((stat = ncp->dispatch->inq_var_filter_info(ncid,varid,id,nparamsp,params))) goto done;
102
103done:
104 if(stat == NC_ENOFILTER) nclog(NCLOGWARN,"Undefined filter: %u",(unsigned)id);
105 return stat;
106}
107
124
125EXTERNL int
126nc_def_var_filter(int ncid, int varid, unsigned int id, size_t nparams, const unsigned int* params)
127{
128 int stat = NC_NOERR;
129 NC* ncp;
130
131 TRACE(nc_inq_var_filter);
132 if((stat = NC_check_id(ncid,&ncp))) return stat;
133 if((stat = ncp->dispatch->def_var_filter(ncid,varid,id,nparams,params))) goto done;
134done:
135 if(stat == NC_ENOFILTER) nclog(NCLOGWARN,"Undefined filter: %u",(unsigned)id);
136 return stat;
137}
138
166EXTERNL int
167nc_inq_var_filter(int ncid, int varid, unsigned int* idp, size_t* nparamsp, unsigned int* params)
168{
169 NC* ncp;
170 size_t nfilters;
171 unsigned int* ids = NULL;
172 int stat = NC_check_id(ncid,&ncp);
173
174 if(stat != NC_NOERR) return stat;
175 TRACE(nc_inq_var_filter);
176
177 /* Get the number of filters on this variable */
178 if((stat = nc_inq_var_filter_ids(ncid,varid,&nfilters, NULL))) goto done;
179 /* If no filters, then return zero */
180 if(nfilters == 0) {
181 if(idp) *idp = 0;
182 goto done;
183 }
184 /* Get the filter ids */
185 if((ids = calloc(sizeof(unsigned int),nfilters)) == NULL) {stat = NC_ENOMEM; goto done;}
186 if((stat = nc_inq_var_filter_ids(ncid,varid,&nfilters, ids))) goto done;
187 /* Get params for the first filter */
188 if((stat = nc_inq_var_filter_info(ncid,varid,ids[0],nparamsp,params))) goto done;
189 if(idp) *idp = ids[0];
190 done:
191 nullfree(ids);
192 return stat;
193}
194
207
208EXTERNL int
209nc_inq_filter_avail(int ncid, unsigned id)
210{
211 int stat = NC_NOERR;
212 NC* ncp;
213
214 stat = NC_check_id(ncid,&ncp);
215 if(stat != NC_NOERR) return stat;
216 if((stat = ncp->dispatch->inq_filter_avail(ncid,id))) goto done;
217done:
218 return stat;
219}
220
221/**************************************************/
222/* Functions for accessing standardized filters */
223
237int
238nc_def_var_bzip2(int ncid, int varid, int level)
239{
240 int stat = NC_NOERR;
241 unsigned ulevel;
242
243 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_BZIP2))) goto done;
244 /* Filter is available */
245 /* 1 <= Level <= 9 */
246 if (level < 1 || level > 9)
247 return NC_EINVAL;
248 ulevel = (unsigned) level; /* Keep bit pattern */
249 if((stat = nc_def_var_filter(ncid,varid,H5Z_FILTER_BZIP2,1,&ulevel))) goto done;
250done:
251 return stat;
252}
253
270int
271nc_inq_var_bzip2(int ncid, int varid, int* hasfilterp, int *levelp)
272{
273 int stat = NC_NOERR;
274 size_t nparams;
275 unsigned params = 0;
276 int hasfilter = 0;
277
278 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_BZIP2))) goto done;
279 /* Filter is available */
280 /* Get filter info */
281 stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_BZIP2,&nparams,NULL);
282 if(stat == NC_ENOFILTER) {stat = NC_NOERR; hasfilter = 0; goto done;}
283 if(stat != NC_NOERR) goto done;
284 hasfilter = 1;
285 if(nparams != 1) {stat = NC_EFILTER; goto done;}
286 if((stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_BZIP2,&nparams,&params))) goto done;
287done:
288 if(levelp) *levelp = (int)params;
289 if(hasfilterp) *hasfilterp = hasfilter;
290 return stat;
291}
292
309int
310nc_def_var_zstandard(int ncid, int varid, int level)
311{
312#ifdef HAVE_ZSTD
313 int stat = NC_NOERR;
314 unsigned ulevel;
315
316 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_ZSTD))) goto done;
317 /* Filter is available */
318 /* Level must be between -131072 and 22 on Zstandard v. 1.4.5 (~202009)
319 Earlier versions have fewer levels (especially fewer negative levels) */
320 if (level < -131072 || level > 22)
321 return NC_EINVAL;
322 ulevel = (unsigned) level; /* Keep bit pattern */
323 if((stat = nc_def_var_filter(ncid,varid,H5Z_FILTER_ZSTD,1,&ulevel))) goto done;
324done:
325 return stat;
326#else
327 return NC_NOERR;
328#endif /*HAVE_ZSTD*/
329}
330
347int
348nc_inq_var_zstandard(int ncid, int varid, int* hasfilterp, int *levelp)
349{
350#ifdef HAVE_ZSTD
351 int stat = NC_NOERR;
352 size_t nparams;
353 unsigned params = 0;
354 int hasfilter = 0;
355
356 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_ZSTD))) goto done;
357 /* Filter is available */
358 /* Get filter info */
359 stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_ZSTD,&nparams,NULL);
360 if(stat == NC_ENOFILTER) {stat = NC_NOERR; hasfilter = 0; goto done;}
361 if(stat != NC_NOERR) goto done;
362 hasfilter = 1;
363 if(nparams != 1) {stat = NC_EFILTER; goto done;}
364 if((stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_ZSTD,&nparams,&params))) goto done;
365done:
366 if(levelp) *levelp = (int)params;
367 if(hasfilterp) *hasfilterp = hasfilter;
368 return stat;
369#else
370 return NC_NOERR;
371#endif /*HAVE_ZSTD*/
372}
373
389int
390nc_def_var_blosc(int ncid, int varid, unsigned subcompressor, unsigned level, unsigned blocksize, unsigned addshuffle)
391{
392#ifdef HAVE_BLOSC
393 int stat = NC_NOERR;
394 unsigned params[7];;
395
396 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_BLOSC))) goto done;
397 /* Filter is available */
398
399 /* Verify parameters */
400 if(addshuffle > (unsigned)BLOSC_BITSHUFFLE) {stat = NC_EINVAL; goto done;}
401 if(subcompressor > (unsigned)BLOSC_ZSTD) {stat = NC_EINVAL; goto done;}
402
403 /* Set the parameters */
404 params[0] = 0;
405 params[1] = 0;
406 params[2] = 0;
407 params[3] = blocksize;
408 params[4] = level;
409 params[5] = addshuffle;
410 params[6] = subcompressor;
411 if((stat = nc_def_var_filter(ncid,varid,H5Z_FILTER_BLOSC,7,params))) goto done;
412done:
413 return stat;
414#else
415 return NC_NOERR;
416#endif
417}
418
441int
442nc_inq_var_blosc(int ncid, int varid, int* hasfilterp, unsigned* subcompressorp,
443 unsigned* levelp, unsigned* blocksizep, unsigned* addshufflep)
444{
445#ifdef HAVE_BLOSC
446 int stat = NC_NOERR;
447 size_t nparams;
448 unsigned params[7];
449 int hasfilter = 0;
450
451 if((stat = nc_inq_filter_avail(ncid,H5Z_FILTER_BLOSC))) goto done;
452 /* Filter is available */
453
454 /* Get filter info */
455 stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_BLOSC,&nparams,NULL);
456 if(stat == NC_ENOFILTER) {stat = NC_NOERR; hasfilter = 0; goto done;}
457 if(stat != NC_NOERR) goto done;
458 hasfilter = 1;
459 if(nparams != 7) {stat = NC_EFILTER; goto done;}
460 if((stat = nc_inq_var_filter_info(ncid,varid,H5Z_FILTER_BLOSC,&nparams,params))) goto done;
461 if(blocksizep) *blocksizep = params[3];
462 if(levelp) *levelp = params[4];
463 if(addshufflep) *addshufflep = params[5];
464 if(subcompressorp) *subcompressorp = params[6];
465done:
466 if(hasfilterp) *hasfilterp = hasfilter;
467 return stat;
468#else
469 return NC_NOERR;
470#endif
471}
EXTERNL int nc_inq_filter_avail(int ncid, unsigned id)
Test if filter is available.
Definition dfilter.c:209
EXTERNL int nc_def_var_filter(int ncid, int varid, unsigned int id, size_t nparams, const unsigned int *params)
Define a new variable filter Assumes HDF5 format using unsigned ints.
Definition dfilter.c:126
int nc_inq_var_blosc(int ncid, int varid, int *hasfilterp, unsigned *subcompressorp, unsigned *levelp, unsigned *blocksizep, unsigned *addshufflep)
Learn whether Blosc compression is on for a variable, and, if so, the settings.
Definition dfilter.c:442
int nc_def_var_zstandard(int ncid, int varid, int level)
Turn on Zstandard compression for a variable.
Definition dfilter.c:310
int nc_def_var_blosc(int ncid, int varid, unsigned subcompressor, unsigned level, unsigned blocksize, unsigned addshuffle)
Turn on blosc for a variable.
Definition dfilter.c:390
int nc_inq_var_bzip2(int ncid, int varid, int *hasfilterp, int *levelp)
Learn whether bzip2 compression is on for a variable, and, if so, the level setting.
Definition dfilter.c:271
EXTERNL int nc_inq_var_filter_info(int ncid, int varid, unsigned int id, size_t *nparamsp, unsigned int *params)
Find the param info about filter (if any) associated with a variable and with specified id.
Definition dfilter.c:95
int nc_def_var_bzip2(int ncid, int varid, int level)
Turn on bzip2 compression for a variable.
Definition dfilter.c:238
EXTERNL int nc_inq_var_filter(int ncid, int varid, unsigned int *idp, size_t *nparams, unsigned int *params)
Find the first filter (if any) associated with a variable.
Definition dfilter.c:167
int nc_inq_var_zstandard(int ncid, int varid, int *hasfilterp, int *levelp)
Learn whether Zstandard compression is on for a variable, and, if so, the level setting.
Definition dfilter.c:348
EXTERNL int nc_inq_var_filter_ids(int ncid, int varid, size_t *nfiltersp, unsigned int *ids)
Find the set of filters (if any) associated with a variable.
Definition dfilter.c:59
Main header file for the C API.
#define NC_EFILTER
Filter operation failed.
Definition netcdf.h:562
#define NC_ENOMEM
Memory allocation (malloc) failure.
Definition netcdf.h:497
#define EXTERNL
Needed for DLL build.
Definition netcdf.h:612
#define NC_EINVAL
Invalid Argument.
Definition netcdf.h:427
#define NC_NOERR
No Error.
Definition netcdf.h:417
#define NC_ENOFILTER
Filter not defined on variable.
Definition netcdf.h:566